euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

8 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip7246 chr1 241053811 241053811 + L1-Ta somatic validated no 245 RGS7
srip18329 chr11 120318242 120318242 - L1-Ta somatic validated no 245 ARHGEF12
srip42639 chr15 86327349 86327349 - L1-Ta somatic validated no 245 KLHL25
srip52320 chr19 28069664 28069664 - L1-Ta somatic validated no 245 .
srip63319 chr20 12860975 12860975 + L1-Ta somatic validated no 245 .
srip92275 chr4 135855702 135855702 + L1-Ta somatic validated no 245 .
srip122519 chr7 113237945 113237945 - L1-Ta somatic validated no 245 .
srip130200 chr8 132139140 132139140 + L1-Ta somatic validated no 245 .